Peer Reviewed Publications


128J. Ruan Y, B Yu, RE Knox, W Zhang, AK Singh, R Cuthbert, P Fobert, R DePauw, S Berraies, A Sharpe, BX Fu, J Sangha. 2021. Conditional Mapping Identified Quantitative Trait Loci for Grain Protein Concentration Expressing Independently of Grain Yield in Canadian Durum Wheat. Front Plant Sci. 2021; 12: 642955. doi: 10.3389/fpls.2021.642955

127J. Banik C, JA Koziel, M De, D Bonds, B Chen, AK Singh, MA Licht. 2021. Biochar-Swine Manure Impact on Soil Nutrients and Carbon Under Controlled Leaching Experiment Using a Midwestern Mollisols. Front. Environ. Sci., 15 April 2021 | https://doi.org/10.3389/fenvs.2021.609621


126J. Banik C, JA Koziel, D Bonds, AK Singh, MA Licht. 2021. Comparing Biochar-Swine Manure Mixture to Conventional Manure Impact on Soil Nutrient Availability and Plant Uptake—A Greenhouse Study. Land 2021, 10(4), 372; https://doi.org/10.3390/land10040372


125J. Kumar S, TG Fetch, RE Knox, AK Singh, JM Clarke, RM Depauw, RD Cuthbert, HL Campbell, D Singh, S Bhavani, CJ Pozniak, B Meyer, FR Clarke. 2020. Mapping of Ug99 stem rust resistance in Canadian durum wheat. Canadian Journal of Plant Pathology. Available online ahead of print: https://doi.org/10.1080/07060661.2020.1843073


124J. Y Ruan, AK Singh, RM DePauw, R Knox, R Cuthbert, B Mccallum, T Fetch. 2020. AAC Succeed Durum Wheat. Canadian Journal of Plant Science. Available online ahead of print: https://doi.org/10.1139/CJPS-2019-0342


123J. Falk KG#, TZ Jubery$, JA O’Rourke, A Singh, S Sarkar, B Ganapathysubramanian@, AK Singh. 2020. Soybean root system architecture traits study through genotypic, phenotypic and shape based clusters. Plant Phenomics. Article ID: 1925495, DOI: 10.34133/2020/1925495


122J. Falk KG#, T Jubery$, SV Mirnezami, KA Parmley#, S Sarkar, A Singh, B Ganapathysubramanian@, AK Singh. 2020. Computer Vision and Machine Learning Enabled Soybean Root Phenotyping Pipeline. BMC Plant Methods. v16, Article number: 5


121J. Okello PN, K Petrovic, AK Singh, B Kontz, FM Mathew. 2020. Characterization of species of Fusarium causing root rot of Soybean (Glycine max L.) in South Dakota, USA. Can J Plant Path. Published online: https://doi.org/10.1080/07060661.2020.1746695


120J. Sari E, RE Knox, Y Ruan, MA Henriquez, S Kumar, AJ Burt, RD Cuthbert, DJ Konkin, S Walkowiak, HL Campbell, AK Singh, J Ross, P Lokuruge, E Hsueh, K Boyle, C Sidebottom, J Condie, S Yates, CJ Pozniak, PR Fobert. 2020. Historic recombination in a durum wheat breeding panel enables high-resolution mapping of Fusarium head blight resistance quantitative trait loci. Scientific Reports. v10, Article number: 7567


119J. Firdissa E Bokore, RE Knox, RD Cuthbert, CJ Pozniak, BD McCallum, A N’Diaye, RM DePauw, HL Campbell, C Munro, A Singh, CW Hiebert, CA McCartney, AG Sharpe, AK Singh, D Spaner, DB Fowler, Y Ruan, S Berraies, B Meyer. 2020. Mapping quantitative trait loci associated with leaf rust resistance in five spring wheat populations using single nucleotide polymorphism markers. PLoS One.

https://doi.org/10.1371/journal.pone.0230855


118J. Ruan Y, Y Bianyun, RE Knox, AK Singh, RM DePauw, R Cuthbert, W Zhang, I Piche, P Gao, A Sharpe, P Fobert. 2020. High Density Mapping of Quantitative Trait Loci Conferring Gluten Strength in Canadian Durum Wheat. Frontiers in Plant Science, v11. 170. https://www.frontiersin.org/article/10.3389/fpls.2020.00170


117J. Assefa T$, J Zhang$, RV Chowda-Reddy$, AN Moran Lauter, A Singh, JA O’Rourke, MA Graham, AK Singh. 2020. Deconstructing the genetic architecture of iron deficiency chlorosis in soybean using genome-wide approaches. BMC Plant Biology. v20, Article number: 42


116J. Zhang J$, AK Singh. 2019. Genetic control and geo-climate adaptation of pod dehiscence provide novel insights into the soybean domestication. G3: Genes, Genomes, Genetics. 10: 545-554.


115J. Parmley K#, K Nagasubramanian, S Sarkar, B Ganapathysubramanian, AK Singh. 2019. Development of Optimized Phenomic Predictors for Efficient Plant Breeding Decisions using Phenomics Assisted Selection in Soybean Plant Phenomics. Plant Phenomics. vol. 2019, Article ID 5809404, https://doi.org/10.34133/2019/5809404


114J. Shine B, Q-M Gao, R-V Chowda-Reddy$, AK Singh, P Kachroo, A Kachroo. 2019. Glycerol-3-phosphate mediates novel rhizobia-induced systemic signaling in soybean. Nature Communications. 10, Article number: 5303


113J. Parmley KA#, RH Higgins#, B Ganapathysubramanian, S Sarkar, AK Singh. 2019. Machine Learning Approaches for Prescriptive Plant Breeding. Scientific Reports. Scientific Reports volume 9, Article number: 17132


112J. Nagasubramanian K, S Jones, AK Singh, S Sarkar, A Singh, B Ganapathysubramanian. 2019. Plant disease identification using explainable 3D deep learning on hyperspectral images. BMC Plant Methods. 15, Article number: 98. DOI: 10.1186/s13007-019-0479-8


111J. Ghosal S, B Zheng, SC Chapman, AB Potgieter, DR Jordan, X Wang, AK Singh, A Singh, M Hirafuji, S Ninomiya, B Ganapathysubramanian1, S Sarkar, W Guo. 2019. A Weakly Supervised Deep Learning Framework for Sorghum Head Detection and Counting. Plant Phenomics. Article ID: 1525874, DOI: 10.34133/2019/1525874


110J. Natukunda MI, KA Parmley, JD Hohenstein, T Assefa, J Zhang, GC MacIntosh, AK Singh. 2019. Identification and Genetic Characterization of Soybean Accessions Exhibiting Antibiosis and Antixenosis Resistance to Aphis glycines (Hemiptera: Aphididae). Journal of Economic Entomology. 112(3): 1428-1438

109J. Ruan Y, AK Singh, RM DePauw, RE Knox, RD Cuthbert, B McCallum, T Fetch, BL Beres. (2019). AAC Stronghold Durum Wheat. Canadian Journal of Plant Science, https://doi.org/10.1139/CJPS-2018-0224

108J. Cuthbert RD, RM DePauw, RE Knox, AK Singh, B McCallum, T Fetch. (2019). AAC Viewfield hard red spring wheat. Canadian Journal of Plant Science, 2019, 99(1): 102-110, https://doi.org/10.1139/cjps-2018-0147

107C. Shoeiby M, A Robles-Kelly, R Timofte, R Zhou, F Lahoud, S Süsstrunk, Z Xiong, Z Shi, C Chen, D Liu, Z-J Zha, F Wu, K Wei, T Zhang, L Wang, Y Fu, K Nagasubramanian, AK Singh, A Singh, S Sarkar, B Ganapathysubramanian (2019) PIRM2018 Challenge on Spectral Image Super-Resolution: Methods and Results. In: Leal-Taixé L., Roth S. (eds) Computer Vision – ECCV 2018 Workshops. ECCV 2018. Lecture Notes in Computer Science, vol 11133. Springer, Cham

106C. Arad B, O Ben-Shahar, R Timofte, LV Gool, L Zhang, M-H Yang, Z Xiong, C Chen, Z Shi, D Liu, F Wu, C Lanaras, S Galliani, K Schindler, T Stiebel, S Koppers, P Seltsam, R Zhou, ME Helou, F Lahoud, M Shahpaski, K Zheng, L Gao, B Zhang, X Cui, H Yu, YB Can, A Alvarez-Gila, J van de Weijer, E Garrote, A Galdran, M Sharma, S Koundinya, A Upadhyay, R Manekar, R Mukhopadhyay, H Sharma, S Chaudhury, K Nagasubramanian, S Ghosal, AK Singh, A Singh, B Ganapathysubramanian, S Sarkar. (2019). NTIRE 2018 Challenge on Spectral Reconstruction from RGB Images. 2018 IEEE/CVF Conference on Computer Vision and Pattern Recognition Workshops. June 18, 2018. New Trends in Image Restoration and Enhancement workshop and challenges on super-resolution, dehazing, and spectral reconstruction CVPR Workshops proceedings. The IEEE Conference on Computer Vision and Pattern Recognition (CVPR) Workshops.

105J. Akdemir D, W Beavis, R Fritsche-Neto, AK Singh, J Isidro-Sánchez (2018). Multi-objective optimized genomic breeding strategies for sustainable food improvement. Heredity. Published online: https://www.nature.com/articles/s41437-018-0147-1

104J. Akintayo, A., GL Tylka, AK Singh, B Ganapathysubramanian, A Singh, S Sarkar. (2018). A deep learning framework to discern and count microscopic nematode eggs. Scientific Reports. 8: 9145 (Available online: 10.1038/s41598-018-27272-w)

103J. RD, RM DePauw, RE Knox, AK Singh, TN McCaig, B McCallum, T Fetch. (2018). AAC W1876 Hard Red Spring Wheat. Can J Plant Sci. 2018, 98(3): 799-808, https://doi.org/10.1139/cjps-2017-0326

102J. Ellouze W, C Hamel, AK Singh, V Mishra, RM DePauw, RE Knox. (2018). Abundance of the arbuscular mycorrhizal fungal taxa associated with the roots and rhizosphere soil of different durum wheat cultivars in the Canadian prairies. Canadian Journal of Microbiology, 2018, 64(8): 527-536, https://doi.org/10.1139/cjm-2017-0637

101J. Gao T, H Emadi, H Saha, J Zhang, A Lofquist, A Singh, B Ganapathysubramanian, S Sarkar, AK Singh, S Bhattacharya. (2018). A Novel Multirobot System for Plant Phenotyping. Robotics 7 (4): 61.

100J. Ghoshal, S, D Blystone, AK Singh, B Ganapathysubramanian, A Singh, S Sarkar. (2018). Bringing consistency to plant stress phenotyping through an explainable deep machine vision framework. Proceedings of the National Academy of Sciences. DOI: 10.1073/pnas.1716999115

99J. Knox RE, S Kumar, AK Singh, RM DePauw, HL Campbell, J Isidro-Sanchez, FR Clarke, CJ Pozniak, A N’Daye, B Meyer, A Sharpe, Y Ruan, RD Cuthbert, D Somers, G Fedak. (2018). High-Density Genetic Mapping of a Major QTL for Resistance to Multiple Races of Loose Smut in a Tetraploid Wheat Cross. PLOS ONE 13(2): e0192261. https://doi.org/10.1371/journal.pone.0192261

98J. Li L, Y Niu, Y Ruan, RM DePauw, AK Singh, Y Gan. 2018. Agronomic Advancement in Tillage, Crop Rotation, Soil Health, and Genetic Gain in Durum Wheat Cultivation: A 17-Year Canadian Story. Agronomy (2018). 8(9), 193; https://doi.org/10.3390/agronomy8090193

97J. N’Diaye A, JK Haile, KT Nilsen, S Walkowiak, Y Ruan, AK Singh, FR Clarke, JM Clarke, CJ Pozniak. (2018). Haplotype Loci Under Selection in Canadian Durum Wheat Germplasm Over 60 Years of Breeding: Association With Grain Yield, Quality Traits, Protein Loss, and Plant Height. Front. Plant Sci., 05 November 2018. https://doi.org/10.3389/fpls.2018.01589

96J. Nagasubramanian K, S Jones, S Sarkar, AK Singh, A Singh, B Ganapathysubramanian. (2018). Hyperspectral band selection using genetic algorithm and support vector machines for early identification of charcoal rot disease in soybean stems. Plant Methods 14:86. https://doi.org/10.1186/s13007-018-0349-9

95J. Sari E, S Berraies, RE Knox, AK Singh, Y Ruan, RD Cuthbert, CJ Pozniak, MA Henriquez, S Kumar, AJ Burt, A N’Diaye, DJ Konkin, AL Cabral, HL Campbell, K Wiebe, J Condie, P Lokuruge, B Meyer, G Fedak, FR Clarke, JM Clarke, DJ Somers, PR Fobert. (2018). High density genetic mapping of Fusarium head blight resistance QTL in tetraploid wheat. PLOS One. Published online (Oct 11, 2018). https://doi.org/10.1371/journal.pone.0204362

94J. Singh AK, B Ganapathysubramanian, S Sarkar, A Singh. (2018). Deep learning for plant stress phenotyping: trends and future perspectives. Trends in Plant Science. Published online. DOI:https://doi.org/10.1016/J tplants.20

93C. Blystone D, S Ghosal, AK Singh, B Ganapathysubramanian, A Singh, Soumik Sarkar. (2018). An Understandable DCNN Framework for Soybean Stress Phenotyping. Proceedings of the First International Workshop on Machine Learning for Cyber-Agricultural Systems. Oct 28, 2018, India.

92C. Shook J, L Wu, T Gangopadhyay, B Ganapathysubramanian, S Sarkar, AK Singh. (2018). Integrating genotype and weather variables for soybean yield prediction using deep learning. Proceedings of the First International Workshop on Machine Learning for Cyber-Agricultural Systems. Oct 28, 2018, India.

91C. Ghosal S, B Zheng, S Chapman, A Potgieter, D Jordan, X Wang, AK Singh, A Singh, B Ganapathysubramanian, S Sarkar, W Guo. (2018). A Label Efficient Deep Learning Framework for Sorghum Head Detection and Counting. Proceedings of the First International Workshop on Machine Learning for Cyber-Agricultural Systems. Oct 28, 2018, India.

90J. Bokore FE, RD Cuthbert, RE Knox, HS Randhawa, CW Hiebert, RM DePauw, AK Singh, A Singh, AG Sharpe, N’Diaye, CJ Pozniak, C McCartney, Y Ruan, S Berraies, B Meyer, C Munro, A Hay, K Ammar, J Huerta-Espino, S Bhavani. (2017). Opportunities for combining stripe rust resistance quantitative trait loci from adapted Canadian spring wheat cultivars. Theor. Appl. Genetics. 130(12):2617-2635. doi: 10.1007/s00122-017-2980-7.

89J. Coser SM, RV Chowdareddy, J Zhang, DS Mueller, A Mengistu, K Wise, TW Allen, A Singh, AK Singh. (2017). Genetic architecture of Charcoal Rot (Macrophomina phaseolina) Resistance in Soybean revealed using a diverse panel. Frontiers in Plant Science. 8:1626.

88J. Cuthbert RD, RM DePauw, RE Knox, AK Singh, TN McCaig (2017) AAC Ryley Canada Prairie Spring Red Wheat. Can J Plant Sci. 97(3): 549-555.

87J. Cuthbert RD, RM DePauw, RE Knox, AK Singh, TN McCaig, B McCallum, T Fetch (2017) AAC Brandon Hard Red Spring Wheat. Can J Plant Sci. 97(2): 393-401.

86J. Cuthbert RD, RM DePauw, RE Knox, AK Singh, TN McCaig, B McCallum, T Fetch (2017) AAC NRG097 Canada Western Special Purpose Spring Wheat. Can J Plant Sci. 97(5): 950-955.

85J. Cuthbert RD, RM DePauw, RE Knox, AK Singh, TN McCaig, B McCallum, T Fetch, BL Beres. (2017). AAC Penhold Canada Prairie Spring Red Wheat. Can J Plant Sci. 98(1): 207-214 .

84J. Isidro-Sánchez J, B Perry, AK Singh, H Wang, RM DePauw, CJ Pozniak, BL Beres, EN Johnson, RD Cuthbert (2017) Effects of seeding rate on durum crop production and physiological responses. Agronomy J 109:1981–1990. doi:10.2134/agronj2016.09.0527.

83J. Jubery T, J Shook, K Parmley, J Zhang, HS Naik, R Higgins, S Sarkar, A Singh, AK Singh, B Ganapathysubramanian (2017) Deploying Fourier coefficients to unravel soybean canopy diversity. Front. Plant Sci. 7:2066.

82J. Luna MPR, DS Mueller, AK Singh, A Mengistu, GL Hartman, KA Wise (2017) Advancing our understanding of charcoal rot in soybeans. Journal of Integrated Pest Management. 8(1).

81J. Moellers TC , A Singh, J Zhang, J Brungardt, M Kabbage, DS Mueller, CR Grau, A Ranjan, DL Smith, RV Chowda-Reddy, AK Singh (2017). Main and epistatic loci studies in soybean for Sclerotinia sclerotiorum resistance reveal multiple modes of resistance in multi-environments. Scientific Reports 7, Article number: 3554. doi:10.1038/s41598-017-03695-9.

80J. Naik HS, J Zhang, A Lofquist, T Assefa, S Sarkar, D Ackerman, A Singh, AK Singh and B Ganapathysubramanian (2017). A real-time phenotyping framework using machine learning for plant stress severity rating in soybean. (Plant Methods; 13:23, DOI: 10.1186/s13007-017-0173-7).

79J. Peixoto LA, TC Moellers, J Zhang, AJ Lorenz, LL Bhering, WD Beavis, AK Singh (2017). Leveraging Genomic Prediction to Scan Germplasm Collection for Crop Improvement. PLOS One 12 (6): e0179191.

78J. Varenhorst AJ, SR Pritchard, ME O’Neal, EW Hodgson, AK Singh (2017) Determining the effectiveness of three-gene pyramids against Aphis glycines (Hemiptera: Aphididae) biotypes. Journal of Economic Entomology 110(6): 2428–2435, https://doi.org/10.1093/jee/tox230.

77J. Xavier AP , AK Singh, YR Kandel, DS Mueller. (2017). Effect of Pod Removal, Foliar Fungicides, and Cultivar on Green Stem Disorder of Soybean. Agronomy J 109(6): 2680-2688. doi:10.2134/agronj2017.04.0203.

76J. Zhang J , HS Naik, T Assefa, S Sarkar, RV Chowda-Reddy, A Singh, B Ganapathysubramanian, AK Singh (2017) Computer vision and machine learning for robust phenotyping in genome-wide studies. Scientific Reports, 7, Article number 44048. doi: 10.1038/srep44048.

75J. Ruan Y, AK Singh, RM DePauw, RE Knox, TN McCaig, RD Cuthbert, B McCallum, T Fetch, B Beres (2016). AAC Congress durum wheat. Can J Plant Sci. 98(2): 483-491 .

74J. Singh AK, RM DePauw, RE Knox, JM Clarke, TN McCaig, RD Cuthbert, Y Ruan (2017). AAC Cabri durum wheat. Can J Plant Sci. 97(1): 135-143.

73J. Singh AK, RM DePauw, RE Knox, JM Clarke, TN McCaig, RD Cuthbert, Y Ruan (2017). AAC Spitfire durum wheat. Can J Plant Sci. 97(1): 157-164.

72C. Ghosal S, D Blystone, AK Singh, B Ganapathysubramanian, A Singh and S Sarkar. (2017). Interpretable Deep Learning applied to Plant Stress Phenotyping, Symposium on Interpretable Machine Learning. NIPS 2017.

71C. Nagasubramanian K, S Jones, AK Singh, A Singh, B Ganapathysubramanian, S Sarkar. (2017). Explaining hyperspectral imaging based plant disease identification: 3D CNN and saliency map, Workshop on Intrepreting, Explaining and Visualizing Deep Learning…now what?. NIPS 2017.

70C. Saha H, T Gao, H Emadi, Z Jiang, A Singh, B Ganapathysubramanian, S Sarkar, AK Singh, S Bhattacharya. (2017). Autonomous mobile sensing platform for spatio-temporal plant phenotyping. Proceedings of DSCC 2017 the ASME 2017 Dynamical Systems and Controls Conference October 11-13, 2017, Tysons, Virginia, USA.

69J. Cuthbert RD, RM DePauw, RE Knox, AK Singh, TN McCaig (2016). AAC Elie hard red spring wheat. Can J Plant Sci. 96(5): 919-927,

68J. Ellouze O , C Hamel, R DePauw, R Knox, R Cuthbert, AK Singh (2016). Potential to breed for mycorrhizal association in durum wheat. Can. J Microbiology. 62(3): 263-71 doi:10.1139/cjm-2014-0598.

67J. Harbach CJ, TW Allen, CR Bowen, JA Davis, CB Hill, M Leitman, BR Leonard, DS Mueller, GB Padgett, XA Phillips, RW Schneider, EJ Sikora, AK Singh, GL Hartman (2016). Delayed senescence in soybean: Terminology, research update, and survey results from growers. Plant Health Prog. 17:76-83..

66J. Lee EA, W Deen, ME Hooyer, A Chambers, G Parkin, R Gordon, AK Singh (2016). The Involvement of Year-to-Year Variation in Thermal Time, Solar Radiation and Soil Available Moisture in Genotype-by-Environment Effects in Maize. Crop Sci. (In press). doi: 10.2135/cropsci2015.04.0231.

65J. McCabe CE, AK Singh, LF Leandro, SR Cianzio, MA Graham (2016). Identifying New sources of resistance to brown stem rot in soybean. Crop Sci. 56:2287–2296. doi: 10.2135/cropsci2015.08.0492.

64J. Singh A, B Ganapathysubramanian, AK Singh, S Sarkar (2016). Machine learning for high-throughput stress phenotyping in plants. Trends in Plant Science. 21(2): 110-124. doi:10.1016/J tplants.2015.10.015.

63J. Singh A, RE Knox, RM DePauw, AK Singh, RD Cuthbert, S Kumar, HL Campbell (2016). Genetic mapping of common bunt resistance and plant height QTL in wheat. Theor Appl Genet. 129(2): 243-56. doi:10.1007/s00122-015-2624-8.

62J. Singh AK, RM DePauw, RE Knox, JM Clarke, TN McCaig, RD Cuthbert, Y Ruan (2016). AAC Durafield durum wheat. Can J Plant Sci. 96(4): 719-725,

61C. Akintayo A, N Lee, V Chawla, M Mullaney, C Marett, AK Singh, A Singh, G Tylka, B Ganapathysubramanian, S Sarkar (2016). An End-to-end Convolutional Selective Autoencoder Approach to Soybean Cyst Nematode Eggs Detection. Proceedings of the 22nd ACM SIGKDD Workshop on Data Science for Food, Energy and Water. (San Francisco, CA).

60J. Pandey M , AK Singh, RM DePauw, F Bokore, W Ellouze, RE Knox, RD Cuthbert (2015). Coleoptile length, gibberellin sensitivity, and plant height variation of durum wheat in Canada. Can J Plant Sci. 95(6):1259-1264.

59J. Singh AK, JM Clarke, RE Knox, RM DePauw, I Wise, J Thomas, TN McCaig, RD Cuthbert, FR Clarke, MR Fernandez (2015). AAC Marchwell durum wheat. Can J Plant Sci. 95: 189-195.

58J. Singh AK, JM Clarke, RM DePauw, RE Knox, TN McCaig, RD Cuthbert (2015). AAC Current durum wheat. Can J Plant Sci. 95(3): 589-594, 10.4141/cjps-2014-326.

57J. Zhang J , A Singh, D Mueller, AK Singh (2015). Genome-wide association and epistasis studies unravel the genetic architecture of sudden death syndrome resistance in soybean. The Plant Journal. 84(6):1124-36. doi: 10.1111/tpJ 13069.

56J. DePauw RM, RE Knox, RD Cuthbert, AK Singh, TN McCaig (2014). AAC Bailey Hard Red Spring Wheat. Can J Plant Sci. 94(1): 175-181.

55J. Fernandez MR, H Wang, AK Singh (2014). Impact of seed discolouration on emergence and early plant growth of durum wheat at different soil gravimetric water contents. Can J Plant Path. 36(4): 509 – 516.

54J. Fernandez MR, SL Fox, P Hucl, AK Singh (2014). Leaf spotting reaction of spring common, durum and spelt wheat, and Kamut under organic management in western Canada. Can J Plant Sci. 94(5): 929-935.

53J. Fernandez MR, SL Fox, P Hucl, AK Singh (2014). Root rot severity and fungal populations in spring common, durum and spelt wheat, and Kamut grown under organic management in western Canada. Can J Plant Sci. 94(5): 937-946.

52J. Fernandez MR, WE May, S Chalmers, ME Savard, AK Singh (2014). Are early foliar fungicide applications on durum wheat grown in southern Saskatchewan beneficial in increasing grain productivity? Can J Plant Sci. 94(5): 891-903.

51J. Singh A, RE Knox, RM DePauw, AK Singh, RD Cuthbert, HL Campbell, S Shorter, S Bhavani (2014). Stripe rust and leaf rust resistance QTL mapping and study of their epistatic interactions in spring wheat over three continents and examining their co-localization with stem rust resistance loci. Theor Appl Genet. 127:2465–2477.

50J. Singh AK, JM Clarke, RE Knox, RM DePauw, TN McCaig, RD Cuthbert, FR Clarke, MR Fernandez (2014). AAC Raymore durum wheat. Can J Plant Sci. 94(7): 1289-1296.

49J. Singh AK, RE Knox, JM Clarke, FR Clarke, A Singh, RM DePauw, RD Cuthbert (2014). Genetics of Pre-Harvest sprouting resistance in a cross of Canadian adapted durum wheat genotypes. Mol Breeding 33: 919-929.

48J. DePauw RM, RE Knox, AK Singh, TN McCaig, JM Clarke, RD Cuthbert (2013). NRG010 General Purpose Spring Wheat. Can J Plant Sci. 93(3): 549-555.

47J. Fu BX, L Schlichting, CJ Pozniak, AK Singh (2013). Pigment loss from semolina to dough: rapid measurement and relationship with pasta colour. J Cereal Sci. 57(3): 560–566.

46J. Randhawa HS, M Asif, C Pozniak, JM Clarke, RJ Graf, SL Fox, DG Humphreys, RE Knox, RM DePauw, AK Singh, RD Cuthbert, P Hucl, D Spaner (2013). Application of Molecular Markers to Wheat Breeding in Canada. Plant Breeding. 132(5): 458–471.

45J. Singh A, MP Pandey , AK Singh, RE Knox, K Ammar, JM Clarke, FR Clarke, RP Singh, CJ Pozniak, RM DePauw, BD McCallum, RD Cuthbert, HS Randhawa, TG Fetch Jr. (2013). Identification and mapping of leaf, stem and stripe rust resistance quantitative trait loci and their interactions in durum wheat. Molecular Breeding. 31(2): 405-418

44J. Singh A, RE Knox, RM DePauw, AK Singh, RD Cuthbert, HL Campbell, D Singh, S Bhavani, T Fetch, F Clarke (2013). Identification and mapping in spring wheat of genetic factors controlling stem rust resistance and the study of their epistatic interactions across multiple environments. Theor Appl Genet 26(8):1951-1964.

43J. Yong H, Y Wei, R DePauw, B Qian, R Lemke, A Singh, R Cuthbert, B McConkey, H Wang (2013). Spring wheat yield in the semiarid Canadian prairies: effects of precipitation timing and soil texture over recent 30 years. Field Crops Research 149: 329–337.

42J. Cruz AF, C Hamel, Y Gan, C Yang, AK Singh, K Kuwada, T Ishii (2012). Phytochemicals to suppress Fusarium head blight in wheat-chickpea rotation. Phytochemistry. 78: 72-80.

41J. DePauw RM, RE Knox, AK Singh, SL Fox, DG Humphreys, P Hucl (2012). Developing Standardized Methods for Breeding Preharvest Sprouting Resistant Wheat, Challenges and Successes in Canadian Wheat. Euphytica. 188(1): 7-14.

40J. Isidro J , R Knox, A Singh, F Clarke, P Krishna, R DePauw, J Clarke, D Somers (2012). Brassinosteroid leaf unrolling QTL mapping in durum wheat. Planta. 236(1): 273-281.

39J. Isidro J , RE Knox, FR Clarke, AK Singh, RM DePauw, JM Clarke, DJ Somers (2012). Quantitative genetic analysis and mapping of leaf angle in durum wheat. Planta. 236(6): 1713-1723.

37J. Knox RE, FR Clarke, JM Clarke, SL Fox, RM DePauw, AK Singh (2012). Enhancing the identification of genetic loci and transgressive segregants for preharvest sprouting resistance in a durum wheat population. Euphytica. 186(1): 193-206.

36J. Singh AK, C Hamel, RM DePauw, RE Knox (2012). Genetic variability in AMF compatibility supports the selection of durum wheat genotypes enhancing soil ecological services in Canadian cropping systems. Can J Microbiology. 58(3): 293-302.

35J. Singh AK, JM Clarke, RE Knox, RM DePauw, TN McCaig, MR Fernandez, FR Clarke (2012). Transcend durum wheat. Can J Plant Sci. 92(4): 809-813.

34J. DePauw RM, RE Knox, DG Humphreys, JB Thomas, SL Fox, PD Brown, AK Singh, C Pozniak, HS Randhawa, DB Fowler, RJ Graf, P Hucl (2011). New breeding tools impact Canadian commercial farmer fields. Czech J Genet. Plant Breed. 47: S28–S34.

33J. Fu BX, L Schlichting, CJ Pozniak, AK Singh (2011). A Fast, Simple and Reliable Method to Predict Pasta Yellowness. Cereal Chem. 88(3): 264–270.

32J. Singh AK, T Coleman, M Tollenaar, EA Lee (2011). Nature of the genetic variation in an elite maize breeding cross. Crop Science. 51: 75-83.

31C. Fox SL, RM DePauw, DG Humphreys, PJ Hucl, AK Singh, CJ Pozniak, PD Brown, GJ Graf, HS Randhawa, HD Voldeng, CA McCartney, CW Hiebert, RE Knox, JB Thomas, L Townley-Smith, TG Fetch Jr. (2011). Canadian initiatives in breeding for stem rust resistance to race Ug99 and variants. Borlaug Global Rust Initiative (BGRI) 2011 Technical Workshop, St. Paul, MN, USA, June 13-16, 2011, pp. 121-126.

30J. Fernandez MR, FR Clarke, RE Knox, JM Clarke, AK Singh (2010). Quantification of effects of leaf spotting diseases on grain yield and market quality of durum wheat using near-isogenic lines. Canadian Journal of Plant Pathology. 32 (2): 177-187.

29J. Ramachandran A, CJ Pozniak, JM Clarke, AK Singh (2010). Carotenoid accumulation during grain development in durum wheat. Journal of Cereal Science. 52 (1): 30-38.

28J. Singh AK, JM Clarke, RM DePauw, RE Knox, FR Clarke, MR Fernandez, TN McCaig (2010). Enterprise durum wheat. Can. J Plant Sci. 90(3): 353-357.

27J. Clarke JM, RE Knox, RM DePauw, FR Clarke, MR Fernandez, TN McCaig, AK Singh (2009). Brigade Durum Wheat. Can. J Plant Sci. 89: 505-509.

26J. Clarke JM, RE Knox, RM DePauw, FR Clarke, TN McCaig, MR Fernandez, AK Singh (2009). Eurostar Durum Wheat. Can. J Plant Sci. 89: 317-320.

25J. Knox RE, CJ Pozniak, FR Clarke, JM Clarke, S Houshmand, AK Singh (2009). Chromosomal location of the cadmium uptake gene (Cdu1) in durum wheat. Genome 52: 741-747.

24J. Singh A, S Reimer, CJ Pozniak, FR Clarke, JM Clarke, RE Knox, AK Singh (2009). Allelic variation at Psy-A1 and association with yellow pigment in durum wheat grain. Theor. Appl. Genet. 118 (8): 1539-1548.

23J. Suprayogi Y, CJ Pozniak, FR Clarke, JM Clarke, RE Knox, AK Singh (2009). Identification and validation of quantitative trait loci for grain protein concentration in adapted Canadian durum wheat populations. Theo Appl Genet. 119(3): 437-448.

22C. Clarke FR, CJ Pozniak, JM Clarke, JE Dexter, RE Knox, TN McCaig, AK Singh (2009). Association mapping of semolina yield in diverse durum wheat germplasm. 4th International Wheat Quality Conference. Wheat Science: Challenges & Opportunities. In RN Chibbar and JE Dexter (eds) Wheat Science Dynamics: Challenges & Opportunities; Agrobios, Jodhpur, India. ISBN : 9788190430982 pp 595-600.

21C. Clarke FR, CJ Pozniak, JM Clarke, RE Knox, N Ames, AK Singh (2009). Identification of chromosomal regions associated with gluten index for marker-assisted selection in durum wheat. In G. Branlard (ed) proC 10th International Gluten Workshop. Sept 7 – 9, 2009. Clermont Ferrand, France; INRA, Paris. pp 230-233.

20C. Clarke JM, CJ Pozniak, FR Clarke, RE Knox, AK Singh (2009). Association mapping of gluten index in durum wheat. In G. Branlard (ed) proC 10th International Gluten Workshop. Sept 7 – 9, 2009. Clermont Ferrand, France; INRA, Paris. pp 234-236.

19C. Clarke JM, JE Dexter, FR Clarke, RE Knox, CJ Pozniak, AK Singh (2009). Milling properties of a durum doubled haploid population. 4th International Wheat Quality Conference. Wheat Science: Challenges & Opportunities. In RN Chibbar and JE Dexter (eds) Wheat Science Dynamics: Challenges & Opportunities; Agrobios, Jodhpur, India. ISBN : 9788190430982. pp 601-605.

18C. DePauw RM, T Fetch, CW Hiebert, DG Humphreys, RE Knox, CJ Pozniak, JB Thomas, AK Singh, R Graf, HS Randhawa, SL Fox, PD Brown, FR Clarke (2009). Sources of resistance to Ug99 and its variants in Canadian germplasm. Conference paper in Borlaug Global Rust Initiative Ug99 workshop Mar 17-20, 2009. Mexico. pp 171-178.

17C. Fox SL, JT Thomas, P Hucl, C Pozniak, RM DePauw, AK Singh, RE Knox, PD Brown, DG Humphreys, HS Randhawa (2009). Progress in breeding for FHB resistance in Canadian spring wheat. 6th Canadian Workshop on Fusarium Head Blight. Nov 1-4, 2009. Ottawa, ON, Canada.

16C. Suprayogi Y, CJ Pozniak, FR Clarke, RE Knox, AK Singh (2009). Validation of a quantitative trait locus for grain protein concentration in durum wheat. In RN Chibbar and JE Dexter (eds) Wheat Science Dynamics: Challenges & Opportunities; Agrobios, Jodhpur, India. pp 617-621.

15J. Reimer S, CJ Pozniak, FR Clarke, JM Clarke, DJ Somers, RE Knox, AK Singh (2008). Association mapping of yellow pigment in an elite collection of durum wheat cultivars and breeding lines. Genome 51: 1016-1025.

14C. Clarke FR, JM Clarke, CJ Pozniak, DJ Somers, JE Dexter, RE Knox, S Reimer, TN McCaig, AK Singh (2008). Association mapping of semolina yield in diverse durum wheat germplasm. In Proceedings of the 11th International Wheat Genetics Symposium, Brisbane, QLD, Australia, 24–29 August 2008. Vol. 2. Edited by R. Appels, R. Eastwood, E. Lagudah, P. Langridge, M. Mackay, L. McIntyre, and P. Sharp. Sydney University Press, Sydney, pp. 485-487.

13C. Pozniak CJ, S Reimer, T Fetch, JM Clarke, FR Clarke, D Somers, RE Knox, AK Singh (2008). Association mapping of Ug99 resistance in a diverse durum wheat population. In Proceedings of the 11th International Wheat Genetics Symposium, Brisbane, QLD, Australia, 24–29 August 2008. Vol. 3. Edited by R. Appels, R. Eastwood, E. Lagudah, P. Langridge, M. Mackay, L. McIntyre, and P. Sharp. Sydney University Press, Sydney, pp. 809-811.

12C. Singh AK, RE Knox, FR Clarke, JM Clarke, DJ Somers, G Fedak, A Singh, R DePauw. (2008). Fusarium Head Blight QTL Mapping in Durum Wheat and Triticum carthlicum Sources of Resistance. In Proceedings of the 11th International Wheat Genetics Symposium, Brisbane, QLD, Australia, 24–29 August 2008. Vol. 3. Edited by R. Appels, R. Eastwood, E. Lagudah, P. Langridge, M. Mackay, L. McIntyre, and P. Sharp. Sydney University Press, Sydney, pp. 845–847.

11J. Adapa PK, GJ Schoenau, LG Tabil, A Singh (2007). Prediction of hardness and durability of alfalfa cubes processed from fractionated sun-cured and dehydrated alfalfa chops. Biosystems Engineering, 98(4): 430-436.

10J. Adapa PK, GJ Schoenau, LG Tabil, EA Arinze, A Singh, AK Dalai (2007). Customized and value-added high quality alfalfa products – a new concept. Agricultural Engineering International: the CIGR Ejournal. Manuscript FP 07 003. Vol. IX. (June): 1-28.

9J. Adapa PK, GJ Schoenau, LG Tabil, S Sokhansanj, A Singh (2007). Compression of fractionated sun-cured and dehydrated alfalfa chops into cubes – Specific Energy Models. Bioresource Technology, 98(1): 38 – 45.

8C. Pozniak CJ, JM Clarke, AK Singh, J Thomas, G Fedak (2007). Progress in Fusarium head blight resistance breeding in Canadian durum wheat. pp. 47 – 50. Conference paper In ProC 5th Canadian Workshop on Fusarium Head Blight. Winnipeg, Canada. 27-30 Nov. 2007.

7J. Adapa PK, AK Singh, GJ Schoenau, LG Tabil (2006). Pelleting characteristics of fractionated alfalfa grinds – hardness models. International Journal of Powder Handling and Processing. v18 (5): 294 – 299.

6J. Lee EA, A Singh, MJ Ash, B Good (2006). The use of sister-lines and the performance of modified single-cross maize hybrids. Crop Science 46: 312 – 320.

5J. Adapa PK, GJ Schoenau, LG Tabil, S Sokhansanj, A Singh (2005). Compression of fractionated sun-cured and dehydrated alfalfa chops into cubes – Pressure & Density Models. Canadian Biosystems Engineering, CSAE. 47: 3.33 – 3.39.

4J. Singh AK, BG Rossnagel, GJ Scoles, RA Pickering (2004). Identification of a quantitatively inherited source of scald (Rhynchosporium secalis Davis) resistance from barley line 926K2/11/1/5/1. Canadian Journal of Plant Science. 84(3): 935 – 938.

3J. Singh AK, BG Rossnagel, GJ Scoles, RA Pickering (2003). Inheritance of scald (Rhynchosporium secalis Davis) resistance from barley lines 4176/10/n/3/2/6 and 145L2. Canadian Journal of Plant Science. 83(2): 417 – 422.

2J. Singh AK, GJ Scoles, RA Pickering, BG Rossnagel (2003). Allelic studies of new sources of scald (Rhynchosporium secalis Davis) resistance in barley. Canadian Journal of Plant Science. 83(4): 709 – 713.

1C. Singh AK, BG Rossnagel, GJ Scoles (2001). New sources of scald (Rhynchosporium secalis Davis) resistance for western Canadian barley. Proceedings of the ‘Soils and Crops 2001’, University of Saskatchewan. pp (150 – 156).